CDS

Accession Number TCMCG047C10806
gbkey CDS
Protein Id GFP89371.1
Location complement(join(870608..870645,871120..871201,871299..871425,871521..871708,871801..871873,871942..871997,872326..872496,872607..872717,872798..872890,873043..873246,873970..874051,874162..874274,875191..875341,877386..877423,877533..877675,877752..877773,878858..878981,879172..879291,879370..879500,880039..880170,880302..880403,884298..884504,884604..884765,886931..887092,889815..889904,890977..891180))
Organism Phtheirospermum japonicum
locus_tag PHJA_001080800

Protein

Length 1041aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJDB3858 BioSample:SAMD00029051
db_source BMAC01000188.1
Definition nuclear pore complex protein nup205 [Phtheirospermum japonicum]
Locus_tag PHJA_001080800

EGGNOG-MAPPER Annotation

COG_category S
Description Nuclear pore complex scaffold, nucleoporins 186/192/205
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14310        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0006999        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0017056        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044611        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTTTCTGGAAATGATCCAGTAGTTGAAGGCTTCGTCGATTGTGTTAGACTTGCATGGGTTGTACATTTGTTTTTGGTACAGGATGGAAATGATTCAAAGGATAGCGACATGAAAAATATTTGCTCATGCTTGGAAGTCATTTTTGCCAATAATGTGTTCCAGTTTTGTCTGGATACGATTCTTCGCAGTGCAGCATATCAGAATGATGATGAGGATATGATGTACATGTACAATGCTTATCTCCACAAATTAATGACGTGCTTTCTTTCTCATCCACTGGCAAGAGACAAGGTAAAAGAAACAAAAGAGAAGGCTAAGGCTATACTTAGTCCGTATCGCACTGCTGCCACACATAATCAGATGATTGAAGGCAGTGGCAATCCTCAAGAAACTCTTGGAGTTGGACAGCAACCTTTTGTCTCCCTACTGGAGTTTGTGAGTGAAATTTACCAGGCCATTACAATTTCTGATACACTAACCAACCTGTACTTTCTCCAGAAGGAACCTGAGCTACTGTCTAGTAATGATGTTATTTGGACATTTGTGAAGTTCTCCGGTGAGGATCACACTAATTTTCAAACACTTGTGGCATTCTTGAAAATGCTGAGTACCTTGGCGTGTAATCCAGAGGGCGCTTCCAAAGTTTTTGAGTTGCTTCAGGGGAACGCGTTTCGCTCCATCGGGTGGAGTACCCTATTCGACTGTTTATCCATTTATGAAGAAAAGTTCAAACAGTCTATTCAGAGTCCTGGAGCAGTATTACCAGAGTTTCAGGAAGGGGATGCCAAAGCACTAGTTGCATACTTGAATGTTCTAAAAGAGGTTGTGGAAAATGGAAGTCCCGTTGAAAGGAAGAACTGGTTTCCTGACACTGAACCATTGTTCAAGCTCCTTAGCTATGAGAATGTGCCACCTTATCTCAAGGGTGCACTGCGTAGTGCCATTGCTACATTTGTCCGTGTATCTCCTGTTATGAAAGATAAAATATGGAGGTACTTAGAGCAGTATGACCTGCCAGTGAATGTTGGGAGCAGCGAACATGCAATGGATACACAGGTTTATGATATGAGATTTGAGTTAAATGAAATTGAAGCACGGAGAGAGCAGTACCCTTCGACTATATCATTTATCAATCTAATAAACATTCTTATTACTGAGGAAAGGGATGTTAGTGACAGAGGAAGAAGATTCATTGGCATCTTCAGATTTATATATGATCATGTATTTGGTCCCTTCCCGCAGAGAGCGTATGCTGATCCTTGTGAGAAATGGCAACTAGTTGTAGCTTGTCTTAAGCATTTTCAGATGATGTTGAGCATGTATGATCTTGGAGAAAATGACAGTGATGCTGTTACTGATCAATCTAAAATTTCTATGATGGGACAGTCTCCACCAATTCATATGAAGCTTCCTGTTGTAGAAATTATGAAGGATTTGTTTCGGTTCTTACGAGGAGTTAATTTTCTAATCACCGAACGCACAAATCAAATTTATGGGCAACTCCTTGAAAAGGCTGTTTTGCTTTCGTTGGAAATCATTATTCTTGTTATGGAAAAAGATTCCATTGGTTCAGATTTTTGGTGCCCTCTGTATCAGTCTGCTTTCAATAAGTTCAATGCTTATGGATATCTTTGTTCACGTATCGTTGGGCTACCACAGTTGCTACTGAAGTCCAATTCTGCAAATGGATTGATTGAGGATTATGCTGCATGCTTAGAGCTACGGTCTGAGGAGTGTCAAATTTTTGAGGACAGCAGCATTGATCCTGGTGTACTAATTATGCAATTGCTTATTGACAATATAAGTAGACCAGCCCCCAATATCACTCATCTATTGCTTAAATTTGATGTTGATAGCCCTGTTGAAAGGACATATCTTCGGCCAAAATTTCATTACAGTTGTTTGAAGGTCATTCTCGAAATTTTGGATAAGCTTTCGAAAGCTGACGTCAATGCACTGCTTCATGAATTTGGTTTTCAGAGAGCGTGGTTGTTGAAGCTTTTAGCAGTAGAGTTACATTCAGCAGACATGATGGATTCCAATCATCGTGAAGCATGCCAAAGTATTCTTATCGAGTTGTTTGGCCAGAGACTTACTGAAAATGGCATTAATTATGGTTCATCTTCATTCATCACTCAAAATGACCAGCAAATTCCCACAATTGGTTCAGTTAGCAAGAGCAAGGTGCTGGAATTGCTCGACGTTGTCCAGTTTGAGTCTCCTGATATCACACAGAAGTCGGCTGAGTTCGTCTCTAGTTTGAAGTATTCATCTCTGGCCGAAGATATACTCAGCAACACAACGACCTCGGAAAGGGATGTCTACTATCATTCGGAACGTGGGGATCGTCTTATTGACCTAGCTTCTTTTAGAGATAAGCTTTGGCAGAAGTGCAATTTGTATAATTCCCAGCCGAGCTCATCTGGGAATGAAGCTGAATTGAATGAAATAAGAGAAGCAATCCAACAACTACTAAGATGGGGATGGAAATACAACAAAAACCTTGAAGAACAAGCTGCCCAGCTTCATATGTTAACAAGCTGGTCTCAGATTGTTGAGGTTTCTGCATCCCAAAGGATTTCATTCCTTGAGAACCGATCTGATATGCTATTTCAGTTGCTAGATGCTTCCCTGAACTTTTCTGGGTCTCCCGACTGTTCTCTAAAGATGGCACAAATATTGACCCAGGTTGGTCTCACATGCATGGCCAAACTACGTGATGAAAGATTTGTCTTCCCCAGTGTCACTTCGGACATGGTTACATGTCTTGACATTATCATGACTAAACAGTTATCGAATGGGGCTTGCCACTCTATCTTGTTCAAGCTTATTATGGCAATTCTTAGAAATGAATCTTCAGAAGCATTGAGAAGGCGCCAATATGCATTGCTTCTTAGCTATTTCCAGTACTGTCGGCACATGCTTGATTCTGATGTTCCTACGACGATTCTGCAATTCTTGTCAGTGGATGAGCAAGATAATGGAGATTTGGATCTAGAAAAGATTGATAAAGATCAGGCTGAATTGGCGCATGCAAACTTTGCAATCCTAAGAAAGGAAGACCAGCCGATTCTTAACTTGGTTGTTGCTGTTGATCACAGGTTTTCTAAGCTAGATCCTTAG
Protein:  
MVSGNDPVVEGFVDCVRLAWVVHLFLVQDGNDSKDSDMKNICSCLEVIFANNVFQFCLDTILRSAAYQNDDEDMMYMYNAYLHKLMTCFLSHPLARDKVKETKEKAKAILSPYRTAATHNQMIEGSGNPQETLGVGQQPFVSLLEFVSEIYQAITISDTLTNLYFLQKEPELLSSNDVIWTFVKFSGEDHTNFQTLVAFLKMLSTLACNPEGASKVFELLQGNAFRSIGWSTLFDCLSIYEEKFKQSIQSPGAVLPEFQEGDAKALVAYLNVLKEVVENGSPVERKNWFPDTEPLFKLLSYENVPPYLKGALRSAIATFVRVSPVMKDKIWRYLEQYDLPVNVGSSEHAMDTQVYDMRFELNEIEARREQYPSTISFINLINILITEERDVSDRGRRFIGIFRFIYDHVFGPFPQRAYADPCEKWQLVVACLKHFQMMLSMYDLGENDSDAVTDQSKISMMGQSPPIHMKLPVVEIMKDLFRFLRGVNFLITERTNQIYGQLLEKAVLLSLEIIILVMEKDSIGSDFWCPLYQSAFNKFNAYGYLCSRIVGLPQLLLKSNSANGLIEDYAACLELRSEECQIFEDSSIDPGVLIMQLLIDNISRPAPNITHLLLKFDVDSPVERTYLRPKFHYSCLKVILEILDKLSKADVNALLHEFGFQRAWLLKLLAVELHSADMMDSNHREACQSILIELFGQRLTENGINYGSSSFITQNDQQIPTIGSVSKSKVLELLDVVQFESPDITQKSAEFVSSLKYSSLAEDILSNTTTSERDVYYHSERGDRLIDLASFRDKLWQKCNLYNSQPSSSGNEAELNEIREAIQQLLRWGWKYNKNLEEQAAQLHMLTSWSQIVEVSASQRISFLENRSDMLFQLLDASLNFSGSPDCSLKMAQILTQVGLTCMAKLRDERFVFPSVTSDMVTCLDIIMTKQLSNGACHSILFKLIMAILRNESSEALRRRQYALLLSYFQYCRHMLDSDVPTTILQFLSVDEQDNGDLDLEKIDKDQAELAHANFAILRKEDQPILNLVVAVDHRFSKLDP